BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035B05SP1|AL430002
(878 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1793 1733 0.0
>3x_Contig1793
Length = 40499
Score = 1733 bits (872), Expect = 0.0
Identities = 875/878 (99%)
Strand = Plus / Minus
Query: 1 atcttcttttgtctttgcaatctgacgtattctggccatttcacgtatctagacaagttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35973 atcttcttttgtctttgcaatctgacgtattctggccatttcacgtatctagacaagttt 35914
Query: 61 ctctttggttgaatggcttggccaataccgaagtttcttggagaagacttggtcaatggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35913 ctctttggttgaatggcttggccaataccgaagtttcttggagaagacttggtcaatggg 35854
Query: 121 ttagacttcttggcagaagcagccttggatgctaatggagctggagcgaccttcttggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35853 ttagacttcttggcagaagcagccttggatgctaatggagctggagcgaccttcttggat 35794
Query: 181 ggagccattgtgaattgattggttgatgcttgtcgatgtggcaaaagaaatccagtggta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35793 ggagccattgtgaattgattggttgatgcttgtcgatgtggcaaaagaaatccagtggta 35734
Query: 241 atagtagaagtcagatccagaaagtaaacaattaacgtttgtatattatttttttttata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35733 atagtagaagtcagatccagaaagtaaacaattaacgtttgtatattatttttttttata 35674
Query: 301 taaaggttattcctccgattagagaaagtgacaaactgaagttcgagtgggtaaggtagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35673 taaaggttattcctccgattagagaaagtgacaaactgaagttcgagtgggtaaggtagg 35614
Query: 361 ctggaaaaaaccaactggtaacagtttgaaataaacccatgcattgcatatatacaacca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35613 ctggaaaaaaccaactggtaacagtttgaaataaacccatgcattgcatatatacaacca 35554
Query: 421 tttctccatttggtaattattttttgaaaattgaacactcttataattatgtgggtgtac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35553 tttctccatttggtaattattttttgaaaattgaacactcttataattatgtgggtgtac 35494
Query: 481 ggattgttatatacgaacagtcccgttttgttttcctaactccttaactgggtcagttta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35493 ggattgttatatacgaacagtcccgttttgttttcctaactccttaactgggtcagttta 35434
Query: 541 ctacgcttttcttttgttttcactccttcttcaatcaatcagggaacagtaatggctggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35433 ctacgcttttcttttgttttcactccttcttcaatcaatcagggaacagtaatggctggt 35374
Query: 601 agttcataagtgtaggtagctcttggagtcacgattctatgatttgtttacaataataca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35373 agttcataagtgtaggtagctcttggagtcacgattctatgatttgtttacaataataca 35314
Query: 661 tattaatctgaatgtaaataatattagattgtttggtttgacttatgacaattgaatttc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35313 tattaatctgaatgtaaataatattagattgtttggtttgacttatgacaattgaatttc 35254
Query: 721 attcatccatcctttagatttctcaattgcagtctcccamatcttccaaccttttcttct 780
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 35253 attcatccatcctttagatttctcaattgcagtctcccacatcttccaaccttttcttct 35194
Query: 781 acttttgtccgaagacttgcttataaagamcttcagatccgtgtcattggtggtacttgg 840
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 35193 acttttgtccgaagacttgcttataaagaccttcagatccgtgtcattggtggtacttgg 35134
Query: 841 gggagctttctcgcctttctctamccctccatagaata 878
||||||||||||||||||||||| ||||||||||||||
Sbjct: 35133 gggagctttctcgcctttctctacccctccatagaata 35096
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8524
Number of Sequences: 1807
Number of extensions: 8524
Number of successful extensions: 76
Number of sequences better than 1.0e-20: 1
length of query: 878
length of database: 10,358,551
effective HSP length: 16
effective length of query: 862
effective length of database: 10,329,639
effective search space: 8904148818
effective search space used: 8904148818
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)